Config is the same across clients — only the file and path differ.
{
"mcpServers": {
"io-github-abbacusgroup-cortex": {
"args": [
"abbacus-cortex"
],
"command": "uvx"
}
}
}Are you the author?
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Cognitive knowledge system with formal ontology, reasoning, and intelligence serving.
Run this in your terminal to verify the server starts. Then let us know if it worked — your result helps other developers.
uvx 'abbacus-cortex' 2>&1 | head -1 && echo "✓ Server started successfully"
After testing, let us know if it worked:
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No known CVEs.
Checked abbacus-cortex against OSV.dev.
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Cognitive knowledge system with formal ontology, reasoning, and intelligence serving.
Cortex captures knowledge objects (decisions, lessons, fixes, sessions, research, ideas), classifies them with an OWL-RL ontology, discovers relationships, reasons over the graph, and serves intelligence through hybrid retrieval.


pip install abbacus-cortex[embeddings]
cortex setup
The setup wizard configures everything: LLM provider, embeddings, dashboard password, background services, and Claude Code registration.
Lightweight (no PyTorch — wizard offers to install embeddings):
pip install abbacus-cortex
cortex setup
Homebrew:
brew install abbacusgroup/cortex/abbacus-cortex
cortex setup
From source:
git clone https://github.com/abbacusgroup/Cortex.git && cd Cortex
uv sync --extra embeddings
cortex setup
Docker:
docker compose up -d
For non-interactive installs (CI, scripts): cortex setup --auto uses environment variables.
cortex capture "Fix: Neo4j pool exhaustion" --type fix --content "Root cause was..."
cortex search "Neo4j"
cortex list
cortex context "Neo4j"
cortex dashboard # web UI at http://localhost:1315
cortex setup writes configuration to ~/.cortex/.env. You can also edit it directly:
CORTEX_LLM_PROVIDER=anthropic
CORTEX_LLM_MODEL=claude-sonnet-4-20250514
CORTEX_LLM_API_KEY=sk-...
CORTEX_EMBEDDING_MODEL=all-mpnet-base-v2
Cortex loads .env from these locations in priority order: environment variables (highest), .env in the current working directory, then ~/.cortex/.env. The recommended location is ~/.cortex/.env for persistent configuration.
See .env.example for all options.
| Command | Description |
|---|---|
cortex setup | Interactive setup wizard |
cortex init | Initialize data directory and stores (deprecated — use cortex setup) |
cortex install | Install background services (macOS/Linux) |
cortex uninstall | Remove background services |
cortex register | Register MCP server with Claude Code |
cortex capture | Capture a knowledge object |
cortex search | Hybrid keyword + semantic search |
cortex read | Read object in full |
cortex list | List objects with filters |
cortex status | Health and counts |
cortex context | Briefing mode (summaries) |
cortex dossier | Entity-centric intelligence brief |
cortex graph | Show object relationships |
cortex synthesize | Cross-document synthesis |
cortex entities | List resolved entities |
cortex serve | Start MCP or HTTP server |
cortex dashboard | Start web dashboard |
cortex backup | Backup data directory to archive |
cortex restore | Restore from backup archive |
cortex doctor | Diagnostics: check, unlock, logs, repair |
cortex pipeline | Re-run intelligence pipeline on an object |
cortex reason | Run advanced reasoning (contradictions, patterns, gaps) |
cortex import-v1 | Import from Cortex v1 database |
cortex import-vault | Import from Obsidian vault |
26 tools for AI agent integration. Localhost-bound HTTP exposes all; non-localhost binds expose only the public set.
Public: cortex_search, `cortex_cont