io.github.IMNMV/clauder

needed.

Connect RStudio to AI assistants for interactive R coding and data analysis.

242 38 tools GitHub PyPI

No known CVEs

No license

Actively maintained

Last commit 13d ago

Works with most clients

Transport: stdio, sse, http

38 tools · ~1.9k tok

Grade C · 0.9% of 200K ctx

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Developer Tools Data

Step 1

Install in your client

Config is the same across clients — only the file and path differ.

Supported in Claude Desktopstdio, sse, http · Node 18+

Paste into ~/Library/Application Support/Claude/claude_desktop_config.json

{
  "mcpServers": {
    "io-github-imnmv-clauder": {
      "args": [
        "needed."
      ],
      "command": "uvx"
    }
  }
}

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Read me

What io.github.IMNMV/clauder does

ClaudeR is an R package that forges a direct link between RStudio and MCP configured LLM agents like Claude Code or Codex. This allows interactive coding sessions where the agent can execute code in your active RStudio environment so it can see the executed code and any generated plots in real-time. If you need help editing a script, a quick analysis done, or an LLM to audit your statistical claims against any manuscript before submission: ClaudeR has got your back.

Test This Server

Run this in your terminal to verify the server starts. Then let us know if it worked — your result helps other developers.

uvx 'needed.' 2>&1 | head -1 && echo "✓ Server started successfully"

After testing, let us know if it worked:

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Scored, not listed

Why this score

Five weighted categories — click any category to see the underlying evidence.

Score breakdown

76/100across 5 weighted dimensions

How we score →

0255075100

−24

Security

Maintenance

Efficiency

Documentation

Compatibility

Categoriesclick a row to see evidence

Security

OSV.dev

No known CVEs.

Checked needed. against OSV.dev.

Inventory

Tools (38)

Click any tool to inspect its schema.

~1.9k tokens total

Community

Reviews

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How easy was setup?Did it work reliably?How was the documentation?

Frequently Asked Questions

Is io.github.IMNMV/clauder safe to use?: io.github.IMNMV/clauder has no known CVEs as of the latest MCPpedia security scan. It does not require authentication, so any local process can connect — keep this in mind in shared environments.
How do I install io.github.IMNMV/clauder?: io.github.IMNMV/clauder supports copy-paste install configs on its MCPpedia page for Claude Desktop, Cursor, and Claude Code. Scroll to the Quick Install section and select your client.
What can io.github.IMNMV/clauder do?: io.github.IMNMV/clauder provides 38 tools: execute_r, execute_r_with_plot, execute_r_async, get_async_result, list_sessions and 33 more. See the full tools list on the server page for descriptions and parameters.
What AI clients work with io.github.IMNMV/clauder?: io.github.IMNMV/clauder is compatible with claude-desktop, cursor, claude-code. It uses stdio and sse and http transport.
Is io.github.IMNMV/clauder actively maintained?: io.github.IMNMV/clauder is actively maintained — last commit was 13 days ago. It has 242 GitHub stars.

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Community

Discussion

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Ask a question, share a tip, or report an issue.

Has anyone used this with Cursor?How do you handle auth?Any alternatives?

Quick Start

# Install if (!require("devtools")) install.packages("devtools") devtools::install_github("IMNMV/ClaudeR") # Set up your AI tool library(ClaudeR) install_clauder() # For Claude Desktop / Cursor install_cli(tools = "claude") # For Claude Code CLI # Start the server in RStudio claudeAddin()

AI agents: See llms-install.md for automated setup instructions.

Recent Updates (click to expand)

AI-Driven Data Annotation. Five MCP tools (load_annotation_data, annotate, run_annotation_job, get_annotation_job_status, cancel_annotation_job) let an agent label a CSV dataset row by row without writing any code. Two modes: interactive (context accumulates across rows) or fully-isolated via run_annotation_job (one fresh claude, codex, gemini, or qwen subprocess per row, or a local ollama HTTP call for free, private, offline labeling). Codex jobs accept a reasoning_effort parameter; Ollama jobs accept an ollama_base_url parameter. The original file is never modified and sessions resume automatically if interrupted.
Multi-Agent Coordination Protocol. Built-in protocol for multiple agents sharing one RStudio session. Agents negotiate through a shared message board in the R environment, agree on a task plan, claim tasks before working, and cross-check each other's output. Load it with multi_agent_prompt().
verify_references tool. Extracts DOIs from a manuscript's bibliography, queries the CrossRef API for each, and returns metadata (title, authors, year, journal) for comparison against manuscript claims. Non-resolving DOIs, metadata mismatches, and references without DOIs are flagged. Works standalone ("check my references") or as Pass 4 of Reviewer Zero.
R Best Practices Protocol. Built-in statistical analysis protocol

... View full README on GitHub

Frequently Asked Questions

Is io.github.IMNMV/clauder safe to use?

io.github.IMNMV/clauder has no known CVEs as of the latest MCPpedia security scan. It does not require authentication, so any local process can connect — keep this in mind in shared environments.

How do I install io.github.IMNMV/clauder?

io.github.IMNMV/clauder supports copy-paste install configs on its MCPpedia page for Claude Desktop, Cursor, and Claude Code. Scroll to the Quick Install section and select your client.

What can io.github.IMNMV/clauder do?

io.github.IMNMV/clauder provides 38 tools: execute_r, execute_r_with_plot, execute_r_async, get_async_result, list_sessions and 33 more. See the full tools list on the server page for descriptions and parameters.

What AI clients work with io.github.IMNMV/clauder?

io.github.IMNMV/clauder is compatible with claude-desktop, cursor, claude-code. It uses stdio and sse and http transport.

Is io.github.IMNMV/clauder actively maintained?